To create a new Java Class/Interface using JDT you can use the following code :
IJavaproject prj;
IPackage package;
prj.createType(package, "your class body");
To find subclasses of a given type using JDT use :
IType type = prj.findType("class name");
ITypeHierarchy typeHierarchy = type.newTypeHierarchy(prj,new NullProgressMonitor());
IType[] subclasses = typeHierarchy.getAllSubtypes(prj);
To check if the given class aka IType is part of this project
IType type;
IResource resource = type.getUnderlyingResource();
boolean isPartOfClass = resource.getProject().equals(project.getProject());
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